full name: Medical Information Mart for Intensive Care III


Johnson, A., Pollard, T., & Mark, R. (2016). MIMIC-III Clinical Database (version 1.4). PhysioNet. https://doi.org/10.13026/C2XW26.


Original publication: https://www.nature.com/articles/sdata201635 Johnson, A. E. W., Pollard, T. J., Shen, L., Lehman, L. H., Feng, M., Ghassemi, M., Moody, B., Szolovits, P., Celi, L. A., & Mark, R. G. (2016). MIMIC-III, a freely accessible critical care database. Scientific Data, 3, 160035.


https://www.google.com/maps/embed?pb=!1m18!1m12!1m3!1d3513.6788339746554!2d-71.1096977!3d42.338552199999995!2m3!1f0!2f0!3f0!3m2!1i1024!2i768!4f13.1!3m3!1m2!1s0x89e3798da35fdbc7%3A0xcd19c9c853764aa7!2sBeth Israel Deaconess Medical Center!5e1!3m2!1sde!2sde!4v1736764258402!5m2!1sde!2sde

NOTES

cf. local hospital guidance on vasopressors

INPUTEVENTS_CV

Due to the asynchronous nature of CareVue data, careful handling during the aggregation for the table is necessary. The MIMIC documentation says the following about the INPUTEVENTS_CV table.

Summing up, for CareVue data, the rate and volume will be asynchronous, and only the CHARTTIME will be available. For rates, the CHARTTIME will correspond to a start time (when the drug was set to that rate). For volumes, the CHARTTIME will correspond to an end time.

Consequently, reprodICU treats the following example (ICUSTAY_ID= 281102, LINKORDERID = 11767284 from INPUTEVENTS_CV) this way: If no amount was infused at the next CHARTTIME, this results in the understanding that the rate was discontinued before any infusion could take place.

CHARTTIME ITEMID AMOUNT AMOUNTUOM RATE RATEUOM STORETIME CGID STOPPED
2136-02-24 15:00:00 30013 0.0 ml null null 2136-02-24 14:53:00 15046 null
2136-02-24 15:00:00 30120 0.0 mg null null 2136-02-24 14:53:00 15046 null
2136-02-24 15:00:00 30120 null null .0500000007 mcgkgmin 2136-02-24 14:53:00 15046 null
2136-02-24 16:00:00 30013 0.0 null null null 2136-02-24 16:00:00 21570 D/C'd
2136-02-24 16:00:00 30120 0.0 mg null null 2136-02-24 16:00:00 21570 D/C'd

MAPPINGS

based mostly on pre-existing MIMIC-III mappings from https://github.com/MIT-LCP/mimic-omop/tree/master, supplemented by the mappings created for MIMIC-IV in the https://github.com/MIT-LCP/mimic-code repository (due to overlap of MetaVision item IDs)

additional mappings

d_labitems_to_loinc_mimic3.csv